BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B03SP1|AL427717
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig711 1788 0.0
>3x_Contig711
Length = 2170
Score = 1788 bits (900), Expect = 0.0
Identities = 970/990 (97%), Gaps = 5/990 (0%)
Strand = Plus / Minus
Query: 20 ttgaacacttttgtttcgaagtctggttataggttcggacagccgaatcagcaccaacag 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 ttgaacactcttgtttcgaagtctggttataggttcggacagccgaatcagcaccaacag 1175
Query: 80 agcatcgcacagcagcagagcagaccaagaaataatgcactagaccaccagttctctcag 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 agcatcgcacagcagcagagcagaccaagaaataatgcactagaccaccagttctctcag 1115
Query: 140 tttactggtgcctcgggtcccagtttcgctcatccacagcatcaacagctgcctatggca 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 tttactggtgcctcgggtcccagtttcgctcatccacagcatcaacagctgcctatggca 1055
Query: 200 ggngtntngctaacgctactactgcagccagtactactagtaatactgctacagcctctg 259
| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 gctggtgtggtaacgctactactgcagccagtactactagtaatactgctacagcctctg 995
Query: 260 atcaccatgtttggatcgatcagttcgcaaacatgcaggtgcacgacaagaccgagttcc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 atcaccatgtttggatcgatcagttcgcaaacatgcaggtgcacgacaagaccgagttcc 935
Query: 320 caacagattataaacagatgtattcgcagtacgaggcgcgtggcgc-tstaantaccatg 378
|||||||||||||||||||||||||||||||||||||||||||||| | | | |||||
Sbjct: 934 caacagattataaacagatgtattcgcagtacgaggcgcgtggcgcctcgtact-ccatg 876
Query: 379 ggtgcaccggtgatggtgtcccattcacaaatgttcccgcgtcatcagcaatctctgatg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ggtgcaccggtgatggtgtcccattcacaaatgttcccgcgtcatcagcaatctctgatg 816
Query: 439 gtgaaccaactcgagtcacaagcgtatgccagtagtagcgcgaas-tcgatgaacaattt 497
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 815 gtgaaccaactcgagtcacaagcgtatgccagtagtagcgcgaagctcgatgaacaattt 756
Query: 498 gctgaactggaaagacaagtgcaagacgatgaaaaagaacagcaacaggacaaggatgac 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gctgaactggaaagacaagtgcaagacgatgaaaaagaacagcaacaggacaaggatgac 696
Query: 558 gatttccatctcaaagaaacgtctcctctagacgaagatcaacgccaattaaaagaagca 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gatttccatctcaaagaaacgtctcctctagacgaagatcaacgccaattaaaagaagca 636
Query: 618 gcccaatccatttacacaactctttcagataaatcatctacaactagttcgaaattttcg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gcccaatccatttacacaactctttcagataaatcatctacaactagttcgaaattttcg 576
Query: 678 aactccaagttccttggactcatgagaaatatcagcgatggtgtaataactctgaaaaag 737
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 575 aactccaagttccttggactcatgagaattatcagcgatggtgtaataactctgaaaaag 516
Query: 738 aacccagatgaggataaatatacggaattatattctccttctaccggtgaaactttttgg 797
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 aacccagatgaggataaatatacggaattatattctccttctaccggtgaaac-ttttgg 457
Query: 798 cgaagagtatttcccagtgcaggatagtgttttaggcgaccccttggactccattggtga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgaagagtatttcccagtgcaggatagtgttttaggcgaccccttggactccattggtga 397
Query: 858 cttatctaatatgagttcatcggaagccgctgcaaaagtgtaccataactccgtttg-aa 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 396 cttatctaatatgagttcatcggaagccgctgcaaaagtgtaccataactccgtttgaaa 337
Query: 917 aaaaaaaaataaaatggtattactaagtatgagtggaggggtatttctctgttgtcagat 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaaaaaaaataaaatggtattactaagtatgagtggaggggtatttctctgttgtcagat 277
Query: 977 ctactkttattttgtcgatacatattgagt 1006
||||| ||||||||||||||||||||||||
Sbjct: 276 ctactgttattttgtcgatacatattgagt 247
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,811
Number of Sequences: 1807
Number of extensions: 11811
Number of successful extensions: 130
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)